Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm18986-201ENSMUST00000216029 1986 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm27627-201ENSMUST00000183644 150 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm29615-201ENSMUST00000185371 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28224-201ENSMUST00000186078 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm29001-201ENSMUST00000186177 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28292-201ENSMUST00000186593 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28101-201ENSMUST00000187608 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm29076-201ENSMUST00000187689 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28302-201ENSMUST00000187931 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28646-201ENSMUST00000188220 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28205-201ENSMUST00000189177 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm29032-201ENSMUST00000189797 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm28695-201ENSMUST00000190300 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm37448-201ENSMUST00000192795 697 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 4930564D02Rik-201ENSMUST00000070584 737 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
H2afb2S4R1M3 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm13996-201ENSMUST00000118456 430 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm5616-201ENSMUST00000165252 384 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm8741-201ENSMUST00000174736 384 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Ighv5-7-201ENSMUST00000192302 244 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 AY036118-201ENSMUST00000200021 923 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm17827-201ENSMUST00000211825 742 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.82□□□□□ -0.52
H2afb2S4R1M3 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 AC126257.2-201ENSMUST00000215507 2300 ntBASIC11.81□□□□□ -0.52
H2afb2S4R1M3 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm6890-201ENSMUST00000114117 776 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm8913-201ENSMUST00000209491 641 ntBASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Gm4157-201ENSMUST00000211647 679 ntBASIC11.81□□□□□ -0.52
H2afb2S4R1M3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms