Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm2383-201ENSMUST00000181461 807 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm29199-201ENSMUST00000187766 775 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm44651-201ENSMUST00000207343 372 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gzmn-202ENSMUST00000225535 989 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trim3Q9R1R2 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm14130-201ENSMUST00000118417 987 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm26361-201ENSMUST00000158868 186 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm25700-201ENSMUST00000177693 110 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Rprl1-202ENSMUST00000198476 238 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm19187-201ENSMUST00000206781 892 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm45186-201ENSMUST00000206874 478 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 AC163667.3-201ENSMUST00000225774 222 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.17□□□□□ -0.62
Trim3Q9R1R2 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trim3Q9R1R2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm38376-201ENSMUST00000195493 2253 ntBASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trim3Q9R1R2 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms