Protein–RNA interactions for Protein: Q9R0S3

Mmp17, Matrix metalloproteinase-17, mousemouse

Predictions only

Length 578 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp17Q9R0S3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm6407-201ENSMUST00000176468 549 ntBASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm9116-201ENSMUST00000192400 1018 ntBASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm9139-201ENSMUST00000218817 700 ntBASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm3619-201ENSMUST00000219947 775 ntBASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 AC134869.4-202ENSMUST00000224350 837 ntBASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Dgkz-203ENSMUST00000111303 4169 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Mmp17Q9R0S3 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Rbms3-201ENSMUST00000044901 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Adra1a-206ENSMUST00000225182 2337 ntBASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Rbm3-205ENSMUST00000115619 969 ntAPPRIS ALT1 TSL 3 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Mir6407-201ENSMUST00000184510 101 ntBASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm19744-202ENSMUST00000186135 948 ntTSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm45758-201ENSMUST00000212448 1006 ntBASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm21358-201ENSMUST00000191645 1659 ntBASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Gm4900-201ENSMUST00000222046 1628 ntBASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Mmp17Q9R0S3 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Rffl-205ENSMUST00000103218 1264 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm6754-201ENSMUST00000117124 913 ntBASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm12247-201ENSMUST00000117585 670 ntBASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 n-R5s84-201ENSMUST00000122591 109 ntBASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC10.93□□□□□ -0.66
Mmp17Q9R0S3 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms