Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm26927-201ENSMUST00000182385 965 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm27839-201ENSMUST00000184242 106 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm39404-201ENSMUST00000216350 313 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 CT010431.1-201ENSMUST00000221249 1080 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 AC125374.1-201ENSMUST00000213573 1400 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm45251-201ENSMUST00000209486 1465 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm20052-201ENSMUST00000200831 1525 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Gm5124-202ENSMUST00000132683 2083 ntBASIC12.25□□□□□ -0.45
Nop56Q9D6Z1 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Gm18584-201ENSMUST00000203098 964 ntBASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Gm45501-201ENSMUST00000211468 2526 ntBASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 AC154634.3-201ENSMUST00000224589 736 ntBASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Olfr1212-201ENSMUST00000055895 936 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Chic1-201ENSMUST00000116547 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Nop56Q9D6Z1 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm44207-201ENSMUST00000204568 1424 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm13736-201ENSMUST00000119272 253 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm13342-201ENSMUST00000121055 207 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm8738-201ENSMUST00000172606 329 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm9002-201ENSMUST00000178437 499 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm27023-201ENSMUST00000182372 285 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm43084-201ENSMUST00000200696 947 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Nop56Q9D6Z1 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms