Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Mrgprd-201ENSMUST00000062163 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Ccdc7Q9D541 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm24255-201ENSMUST00000104481 128 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm8343-201ENSMUST00000182705 994 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm1840-201ENSMUST00000051687 1432 ntBASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Ccdc7Q9D541 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm22323-201ENSMUST00000103832 109 ntBASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm38117-201ENSMUST00000194653 939 ntBASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm38317-201ENSMUST00000195564 343 ntBASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Ccdc7Q9D541 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.2
Ccdc7Q9D541 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.77□□□□□ -0.2
Ccdc7Q9D541 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Ccdc7Q9D541 Gm22133-201ENSMUST00000102082 109 ntBASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Gm13326-201ENSMUST00000118730 1011 ntBASIC13.77□□□□□ -0.21
Ccdc7Q9D541 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.77□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms