Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm44487-201ENSMUST00000205145 325 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Cldnd1Q9CQX5 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm12247-201ENSMUST00000117585 670 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm13445-201ENSMUST00000121664 307 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm15620-201ENSMUST00000122949 270 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm9630-201ENSMUST00000178304 885 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 AC153152.3-201ENSMUST00000222188 1135 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm5468-202ENSMUST00000227851 682 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm18642-201ENSMUST00000206642 1400 ntBASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Cldnd1Q9CQX5 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Cldnd1Q9CQX5 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.08□□□□□ -0.47
Cldnd1Q9CQX5 Gm2420-201ENSMUST00000119864 2149 ntBASIC12.08□□□□□ -0.47
Cldnd1Q9CQX5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm6322-201ENSMUST00000118789 1004 ntBASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Gm9673-201ENSMUST00000119287 781 ntBASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Cldnd1Q9CQX5 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms