Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15.85■□□□□ 0.13
Rtn4Q99P72 CT030652.1-201ENSMUST00000227377 1235 ntBASIC15.85■□□□□ 0.13
Rtn4Q99P72 3830403N18Rik-201ENSMUST00000033458 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Bcdin3d-201ENSMUST00000040313 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Gm37309-201ENSMUST00000194994 1639 ntBASIC15.85■□□□□ 0.13
Rtn4Q99P72 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Slc22a13-201ENSMUST00000084797 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Gm44834-201ENSMUST00000206671 1396 ntBASIC15.85■□□□□ 0.13
Rtn4Q99P72 AC154404.1-201ENSMUST00000223601 2077 ntBASIC15.85■□□□□ 0.13
Rtn4Q99P72 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Rtn4Q99P72 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm13264-201ENSMUST00000138416 2011 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 2610017A05Rik-201ENSMUST00000204670 1661 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm11411-201ENSMUST00000117951 719 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm11320-201ENSMUST00000119434 463 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm13626-201ENSMUST00000119435 402 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Klra14-ps-201ENSMUST00000119532 802 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm25102-201ENSMUST00000122479 112 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm17233-201ENSMUST00000168470 698 ntTSL 3 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Rtn4Q99P72 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.84■□□□□ 0.13
Rtn4Q99P72 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rtn4Q99P72 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rtn4Q99P72 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Rtn4Q99P72 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Rtn4Q99P72 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm37893-201ENSMUST00000192826 2437 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm23270-201ENSMUST00000104055 131 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Etfbkmt-207ENSMUST00000147934 1092 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Obox6-ps1-201ENSMUST00000176658 1042 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm7891-201ENSMUST00000190284 843 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm44716-201ENSMUST00000209007 710 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 AC123658.1-201ENSMUST00000228364 867 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Nme7-201ENSMUST00000086028 834 ntTSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm18263-201ENSMUST00000220846 1928 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Rtn4Q99P72 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms