Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm23771-201ENSMUST00000178702 110 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm8100-201ENSMUST00000182906 988 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm28686-201ENSMUST00000187404 609 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm44329-201ENSMUST00000197469 112 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 AC154290.1-201ENSMUST00000223786 1240 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.43□□□□□ -0.74
Scrt1Q99M85 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC10.43□□□□□ -0.74
Scrt1Q99M85 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Scrt1Q99M85 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm5780-201ENSMUST00000217774 1834 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm12816-201ENSMUST00000118069 1212 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm23085-201ENSMUST00000157849 293 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Mir7076-201ENSMUST00000183519 74 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm5542-201ENSMUST00000195485 1089 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm43184-201ENSMUST00000197247 542 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm17889-201ENSMUST00000198410 598 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm17831-201ENSMUST00000205579 900 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm5879-201ENSMUST00000089501 1209 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 AC154639.1-201ENSMUST00000224393 2849 ntBASIC10.42□□□□□ -0.74
Scrt1Q99M85 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC10.42□□□□□ -0.74
Scrt1Q99M85 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Scrt1Q99M85 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.41□□□□□ -0.74
Scrt1Q99M85 AC156031.2-201ENSMUST00000213107 3310 ntBASIC10.41□□□□□ -0.74
Scrt1Q99M85 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Scrt1Q99M85 Gm42943-201ENSMUST00000199676 3242 ntBASIC10.41□□□□□ -0.74
Scrt1Q99M85 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Scrt1Q99M85 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Scrt1Q99M85 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms