Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdk5rap3Q99LM2 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm13297-201ENSMUST00000120205 934 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm5745-201ENSMUST00000183748 313 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm9823-201ENSMUST00000051212 327 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm8420-201ENSMUST00000097103 598 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Pex11g-201ENSMUST00000004686 2870 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Syk-201ENSMUST00000055087 5122 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdk5rap3Q99LM2 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Fnbp1-210ENSMUST00000113564 3892 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Gm12015-201ENSMUST00000117065 843 ntBASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Gm15370-201ENSMUST00000117158 253 ntBASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Cbx7-201ENSMUST00000089293 3388 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdk5rap3Q99LM2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm5847-201ENSMUST00000178959 1595 ntBASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Cdk5rap3Q99LM2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms