Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gm14441-201ENSMUST00000121960 540 ntBASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Cstf3Q99LI7 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Cstf3Q99LI7 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm14109-201ENSMUST00000118814 309 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm12201-201ENSMUST00000120657 1234 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm6963-201ENSMUST00000147879 379 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm27046-201ENSMUST00000182160 463 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm43630-201ENSMUST00000201550 776 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 AC125350.2-201ENSMUST00000224737 727 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Ninl-201ENSMUST00000109896 5093 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Gm43773-201ENSMUST00000198548 2162 ntBASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC11.45□□□□□ -0.58
Cstf3Q99LI7 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 AC129931.1-201ENSMUST00000228865 1861 ntBASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ehd3-201ENSMUST00000024860 3658 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Cstf3Q99LI7 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms