Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Gm10829-201ENSMUST00000202084 2988 ntBASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Pcdhga11Q91XY8 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 AC113031.8-201ENSMUST00000227856 631 ntBASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Pcdhga11Q91XY8 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm20482-202ENSMUST00000174729 825 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm38000-201ENSMUST00000192390 1215 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 AC166344.1-202ENSMUST00000224139 234 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm10312-201ENSMUST00000078515 489 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Usp44-202ENSMUST00000216224 2449 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Gm37131-201ENSMUST00000192502 1561 ntBASIC11.5□□□□□ -0.57
Pcdhga11Q91XY8 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Pcdhga11Q91XY8 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms