Protein–RNA interactions for Protein: Q8VDW0

Ddx39a, ATP-dependent RNA helicase DDX39A, mousemouse

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx39aQ8VDW0 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ddx39aQ8VDW0 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm11783-201ENSMUST00000119549 885 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm11836-201ENSMUST00000121022 441 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm4654-201ENSMUST00000183305 982 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm9136-201ENSMUST00000193368 454 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm38151-201ENSMUST00000195085 289 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm6450-201ENSMUST00000200896 574 ntBASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Rpl9-ps6-201ENSMUST00000078034 691 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ddx39aQ8VDW0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm23045-201ENSMUST00000175041 96 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm18367-201ENSMUST00000176139 600 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm27910-201ENSMUST00000185004 107 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm28937-201ENSMUST00000185413 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm29400-201ENSMUST00000187208 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm28662-201ENSMUST00000188446 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm28251-201ENSMUST00000188835 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm37318-201ENSMUST00000194325 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm38017-201ENSMUST00000194768 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm37287-201ENSMUST00000195449 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm37793-201ENSMUST00000195548 695 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Hopx-201ENSMUST00000081964 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx39aQ8VDW0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 98.8 ms