Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm16215-201ENSMUST00000161990 637 ntBASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mir6977-201ENSMUST00000184960 64 ntBASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm19220-201ENSMUST00000222682 803 ntBASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm24447-201ENSMUST00000083977 338 ntBASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mlxipl-201ENSMUST00000005507 3622 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Zfp957-201ENSMUST00000040802 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 AC096628.2-201ENSMUST00000225443 1413 ntBASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Ccdc9Q8VC31 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Ipo7-201ENSMUST00000084731 4763 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Slc25a44-202ENSMUST00000168755 3418 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Fam186a-202ENSMUST00000100209 9334 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Scn8a-201ENSMUST00000082209 11293 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Gm6992-201ENSMUST00000217973 1607 ntBASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Calu-201ENSMUST00000031779 3229 ntAPPRIS P5 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Lrpap1-201ENSMUST00000030986 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ccdc9Q8VC31 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm5441-201ENSMUST00000186454 5181 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Ctc1-202ENSMUST00000116359 3978 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm8752-201ENSMUST00000173427 1694 ntBASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 AC153380.1-201ENSMUST00000214959 2364 ntBASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm11524-201ENSMUST00000119349 807 ntBASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm27437-201ENSMUST00000183429 107 ntBASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm5161-201ENSMUST00000075243 853 ntBASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Arhgef2-231ENSMUST00000177498 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ccdc9Q8VC31 Gm37031-201ENSMUST00000195487 2530 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 33 ms