Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm24548-201ENSMUST00000158650 108 ntBASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm16379-201ENSMUST00000161469 348 ntBASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm28882-201ENSMUST00000185504 314 ntBASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gm8762-201ENSMUST00000193486 339 ntBASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 BC043934-202ENSMUST00000185694 2356 ntBASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Trim9-202ENSMUST00000110522 4405 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Gid8-202ENSMUST00000078687 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Epha5-205ENSMUST00000113403 4675 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Nudcd3Q8R1N4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm11700-201ENSMUST00000119409 403 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm25261-201ENSMUST00000157416 134 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Gm40466-201ENSMUST00000212174 422 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 AC126257.1-201ENSMUST00000213195 1536 ntBASIC11.79□□□□□ -0.52
Nudcd3Q8R1N4 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms