Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm38002-201ENSMUST00000193255 180 ntBASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm42937-201ENSMUST00000197360 752 ntBASIC11□□□□□ -0.65
H2afjQ8R1M2 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm9004-201ENSMUST00000218739 1222 ntBASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gm18782-201ENSMUST00000209023 1399 ntBASIC11□□□□□ -0.65
H2afjQ8R1M2 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
H2afjQ8R1M2 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
H2afjQ8R1M2 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm38292-201ENSMUST00000192646 3045 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Zfp646-201ENSMUST00000050383 6310 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm45428-201ENSMUST00000209619 1789 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm12742-201ENSMUST00000117326 410 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm8908-201ENSMUST00000121633 1024 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm25043-201ENSMUST00000158604 212 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm37424-201ENSMUST00000191727 561 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm10608-202ENSMUST00000213924 676 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 AC166349.1-201ENSMUST00000220866 695 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm25857-201ENSMUST00000082788 129 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Pias2-203ENSMUST00000168882 4984 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Pabpc1-201ENSMUST00000001809 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
H2afjQ8R1M2 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
H2afjQ8R1M2 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 92.1 ms