Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 1300017J02Rik-202ENSMUST00000123530 1874 ntTSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rtn1Q8K0T0 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm11439-201ENSMUST00000118598 409 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm27341-201ENSMUST00000183570 106 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 AC107638.1-201ENSMUST00000213690 1061 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm18730-201ENSMUST00000218038 343 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Gm17917-201ENSMUST00000218561 953 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Mir433-201ENSMUST00000093564 124 ntBASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Rtn1Q8K0T0 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rtn1Q8K0T0 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn1Q8K0T0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn1Q8K0T0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Rtn1Q8K0T0 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
Rtn1Q8K0T0 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm13812-201ENSMUST00000118061 1347 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm13810-201ENSMUST00000118584 1347 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm23596-201ENSMUST00000104304 132 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm14277-201ENSMUST00000121195 360 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm28686-201ENSMUST00000187404 609 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Rtn1Q8K0T0 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms