Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm14130-201ENSMUST00000118417 987 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm4760-201ENSMUST00000119663 1030 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm26361-201ENSMUST00000158868 186 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.95□□□□□ -0.5
Clip4Q8CI96 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Clip4Q8CI96 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm7993-201ENSMUST00000200970 1384 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm25700-201ENSMUST00000177693 110 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm8856-201ENSMUST00000185254 1144 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Rprl1-202ENSMUST00000198476 238 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm9996-201ENSMUST00000070359 913 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Aurkc-201ENSMUST00000086248 1154 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Gm43908-201ENSMUST00000205074 1472 ntBASIC11.94□□□□□ -0.5
Clip4Q8CI96 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Clip4Q8CI96 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC11.93□□□□□ -0.5
Clip4Q8CI96 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Clip4Q8CI96 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms