Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Gm45496-201ENSMUST00000209918 2917 ntBASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcpip1Q8CDG3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Wdcp-202ENSMUST00000085793 1992 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm9333-201ENSMUST00000205452 1323 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Asb17os-201ENSMUST00000156292 496 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm3096-201ENSMUST00000185770 364 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm9230-201ENSMUST00000188228 532 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Gm38273-201ENSMUST00000194987 2382 ntBASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcpip1Q8CDG3 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm11930-201ENSMUST00000117788 190 ntBASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm5419-201ENSMUST00000119301 527 ntBASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.71□□□□□ -0.37
Vcpip1Q8CDG3 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcpip1Q8CDG3 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms