Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Lrif1Q8CDD9 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Mir8109-201ENSMUST00000184375 117 ntBASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Gm38341-201ENSMUST00000195357 515 ntBASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Gm21769-201ENSMUST00000211922 111 ntBASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Gm10608-202ENSMUST00000213924 676 ntBASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Lrif1Q8CDD9 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Gm44152-201ENSMUST00000205007 1691 ntBASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Gm43937-201ENSMUST00000204640 3122 ntBASIC11.71□□□□□ -0.54
Lrif1Q8CDD9 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Zfp384-206ENSMUST00000112425 2691 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm24830-201ENSMUST00000102024 166 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm5904-201ENSMUST00000210286 865 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Olfr524-201ENSMUST00000051943 1058 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm26232-201ENSMUST00000083360 166 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Rnu1b6-201ENSMUST00000083839 166 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Gm37827-201ENSMUST00000194486 1542 ntBASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lrif1Q8CDD9 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lrif1Q8CDD9 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms