Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gm24934-201ENSMUST00000103764 111 ntBASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gm14644-201ENSMUST00000116671 647 ntBASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 AY036118-201ENSMUST00000200021 923 ntBASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Ctnnd1-204ENSMUST00000099941 5783 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vps53Q8CCB4 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm13142-201ENSMUST00000117213 1453 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Setx-201ENSMUST00000061578 10970 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Adcy8-202ENSMUST00000228014 6900 ntAPPRIS ALT2 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm23949-201ENSMUST00000104027 127 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm13408-201ENSMUST00000119822 798 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm13935-201ENSMUST00000121859 798 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm16339-201ENSMUST00000160954 929 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Nipsnap3a-204ENSMUST00000188045 1099 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm43868-201ENSMUST00000205187 2114 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm45770-201ENSMUST00000212105 616 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm43081-201ENSMUST00000199082 1380 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Gm7537-201ENSMUST00000221660 1414 ntBASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vps53Q8CCB4 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vps53Q8CCB4 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms