Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 AC122350.1-201ENSMUST00000228135 533 ntBASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Gm13384-201ENSMUST00000117166 1344 ntBASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Rd3Q8BRE0 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm11783-201ENSMUST00000119549 885 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm24844-201ENSMUST00000158679 127 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm23153-201ENSMUST00000175323 313 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Mir6998-201ENSMUST00000183343 64 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm43852-201ENSMUST00000202098 917 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm18636-201ENSMUST00000218846 1066 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rsph14-201ENSMUST00000009214 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Rd3Q8BRE0 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 AC166836.1-201ENSMUST00000219933 1795 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm38094-201ENSMUST00000195864 2978 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Map1b-203ENSMUST00000223725 2669 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm25076-201ENSMUST00000104098 132 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Gm3150-201ENSMUST00000166418 204 ntBASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.53□□□□□ -0.4
Rd3Q8BRE0 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms