Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm11619-201ENSMUST00000117474 237 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm12179-201ENSMUST00000118344 1272 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm25226-201ENSMUST00000158198 123 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 AC118639.2-201ENSMUST00000226289 223 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ptprm-203ENSMUST00000224091 3773 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm14270-201ENSMUST00000118388 846 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Snhg3-202ENSMUST00000141090 581 ntTSL 2 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm35657-201ENSMUST00000215869 989 ntTSL 5 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Gm18499-201ENSMUST00000220808 1021 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 AC164437.3-201ENSMUST00000228323 347 ntBASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Ttc28Q80XJ3 Ralbp1-202ENSMUST00000166543 4089 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Gm17709-201ENSMUST00000174536 1096 ntBASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Ttc28Q80XJ3 Gm26826-201ENSMUST00000181317 1395 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms