Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Usp6nlQ80XC3 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 AC159195.1-201ENSMUST00000225867 2086 ntBASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Usp6nlQ80XC3 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp6nlQ80XC3 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
Usp6nlQ80XC3 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm12628-201ENSMUST00000122193 382 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm24398-201ENSMUST00000157870 109 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm15744-201ENSMUST00000161734 213 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm10807-201ENSMUST00000177134 795 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm28937-201ENSMUST00000185413 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm29400-201ENSMUST00000187208 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm28662-201ENSMUST00000188446 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm28251-201ENSMUST00000188835 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm37981-201ENSMUST00000194280 535 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm37318-201ENSMUST00000194325 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm38017-201ENSMUST00000194768 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm37287-201ENSMUST00000195449 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm37793-201ENSMUST00000195548 695 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm8574-201ENSMUST00000203207 924 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm23680-201ENSMUST00000083162 164 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gm5780-201ENSMUST00000217774 1834 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp6nlQ80XC3 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Glo1-201ENSMUST00000024823 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp6nlQ80XC3 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms