Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ubfd1Q78JW9 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm15573-201ENSMUST00000119487 540 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm4726-201ENSMUST00000135604 736 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm6019-201ENSMUST00000148369 736 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm44270-201ENSMUST00000203084 1234 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm9132-201ENSMUST00000210182 832 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Emp3-203ENSMUST00000210297 601 ntAPPRIS P1 TSL 3 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm29787-201ENSMUST00000222129 849 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ubfd1Q78JW9 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm11956-201ENSMUST00000119525 512 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC11.53□□□□□ -0.56
Ubfd1Q78JW9 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms