Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Fcgr2b-203ENSMUST00000159688 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ccdc85bQ6PDY0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm24231-201ENSMUST00000104315 133 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm11560-201ENSMUST00000117567 948 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm15207-201ENSMUST00000119259 442 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm10169-201ENSMUST00000121822 348 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 1700006J14Rik-204ENSMUST00000161511 574 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm43854-201ENSMUST00000200418 394 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Ighv1-86-201ENSMUST00000200562 353 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm44506-201ENSMUST00000206278 965 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 AC113082.1-201ENSMUST00000217324 327 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm18968-201ENSMUST00000221319 862 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 CT009489.1-201ENSMUST00000227740 1893 ntBASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Ccdc85bQ6PDY0 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc85bQ6PDY0 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc85bQ6PDY0 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Ccdc85bQ6PDY0 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms