Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Krt40-202ENSMUST00000107443 1080 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Gm11993-201ENSMUST00000121861 820 ntBASIC14.03□□□□□ -0.16
Col11a2Q64739 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a2Q64739 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a2Q64739 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a2Q64739 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a2Q64739 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Gm9625-201ENSMUST00000180422 955 ntBASIC14.03□□□□□ -0.16
Col11a2Q64739 Gm44605-201ENSMUST00000206892 949 ntBASIC14.03□□□□□ -0.16
Col11a2Q64739 AC129975.1-201ENSMUST00000224816 592 ntBASIC14.03□□□□□ -0.16
Col11a2Q64739 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.03□□□□□ -0.16
Col11a2Q64739 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Col11a2Q64739 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC14.02□□□□□ -0.16
Col11a2Q64739 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm16048-201ENSMUST00000134250 663 ntTSL 3 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Aamdc-206ENSMUST00000136757 789 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm4462-201ENSMUST00000166453 492 ntBASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm17606-201ENSMUST00000169818 234 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Mir6359-201ENSMUST00000183668 81 ntBASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm36982-201ENSMUST00000193796 1128 ntBASIC14.02□□□□□ -0.16
Col11a2Q64739 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC14.02□□□□□ -0.16
Col11a2Q64739 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Col11a2Q64739 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 CT025689.1-201ENSMUST00000225214 283 ntBASIC14.02□□□□□ -0.16
Col11a2Q64739 4933407L21Rik-201ENSMUST00000027426 1146 ntAPPRIS P5 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Col11a2Q64739 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
Col11a2Q64739 Gm19692-201ENSMUST00000203856 2084 ntBASIC14.02□□□□□ -0.17
Col11a2Q64739 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Col11a2Q64739 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 Gm37391-201ENSMUST00000194891 2318 ntBASIC14.02□□□□□ -0.17
Col11a2Q64739 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
Col11a2Q64739 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Col11a2Q64739 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm14398-201ENSMUST00000117287 1073 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col11a2Q64739 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm18001-201ENSMUST00000212023 688 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 Rps2-ps12-201ENSMUST00000214262 785 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 AC134537.1-201ENSMUST00000219205 265 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 AC164099.1-201ENSMUST00000227780 333 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col11a2Q64739 Krtap3-3-201ENSMUST00000092700 736 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Col11a2Q64739 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Col11a2Q64739 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Adam20-201ENSMUST00000056331 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Gm5822-201ENSMUST00000161562 1378 ntBASIC14.01□□□□□ -0.17
Col11a2Q64739 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Col11a2Q64739 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Col11a2Q64739 Klf3-202ENSMUST00000166409 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms