Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC15.08■□□□□ 0
Clcn1Q64347 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn1Q64347 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Clcn1Q64347 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Clcn1Q64347 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
Clcn1Q64347 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC15.07■□□□□ 0
Clcn1Q64347 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC15.07■□□□□ 0
Clcn1Q64347 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 AC166836.1-201ENSMUST00000219933 1795 ntBASIC15.07■□□□□ 0
Clcn1Q64347 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC15.07■□□□□ 0
Clcn1Q64347 Gm13899-201ENSMUST00000121519 1255 ntBASIC15.07■□□□□ 0
Clcn1Q64347 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC15.07■□□□□ 0
Clcn1Q64347 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Gm5706-201ENSMUST00000181525 993 ntBASIC15.07■□□□□ 0
Clcn1Q64347 Gm3671-201ENSMUST00000182463 1007 ntBASIC15.07■□□□□ 0
Clcn1Q64347 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC15.07■□□□□ 0
Clcn1Q64347 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Clcn1Q64347 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm1995-201ENSMUST00000220838 2602 ntBASIC15.06■□□□□ 0
Clcn1Q64347 AC129931.1-201ENSMUST00000228865 1861 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 2610203C22Rik-201ENSMUST00000115480 1246 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Gm11340-201ENSMUST00000119226 412 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Gm8737-201ENSMUST00000122208 642 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm13966-201ENSMUST00000148420 832 ntTSL 3 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm24844-201ENSMUST00000158679 127 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC15.06■□□□□ 0
Clcn1Q64347 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 AC124457.1-201ENSMUST00000198845 120 ntBASIC15.06■□□□□ 0
Clcn1Q64347 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Clcn1Q64347 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC15.06■□□□□ 0
Clcn1Q64347 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Clcn1Q64347 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Clcn1Q64347 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Clcn1Q64347 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.06■□□□□ 0
Clcn1Q64347 AC123834.1-201ENSMUST00000225346 2043 ntBASIC15.05■□□□□ 0
Clcn1Q64347 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC15.05■□□□□ 0
Clcn1Q64347 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Clcn1Q64347 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Clcn1Q64347 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Clcn1Q64347 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Clcn1Q64347 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Clcn1Q64347 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clcn1Q64347 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Clcn1Q64347 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Clcn1Q64347 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
Clcn1Q64347 Gm12516-201ENSMUST00000120819 385 ntBASIC15.05■□□□□ -0
Clcn1Q64347 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms