Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Gm18983-201ENSMUST00000222884 2729 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Zfp248Q640N4 AC131068.2-201ENSMUST00000226175 1453 ntBASIC9.02□□□□□ -0.97
Zfp248Q640N4 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC9.02□□□□□ -0.97
Zfp248Q640N4 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm38194-201ENSMUST00000194529 2211 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Nf1-202ENSMUST00000108251 9217 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm11989-201ENSMUST00000117240 672 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm11362-201ENSMUST00000118838 850 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm5419-201ENSMUST00000119301 527 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm7722-201ENSMUST00000120646 741 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm25857-201ENSMUST00000082788 129 ntBASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
Zfp248Q640N4 Gm9544-201ENSMUST00000223349 2482 ntBASIC9□□□□□ -0.97
Zfp248Q640N4 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Adcy6-201ENSMUST00000096224 6038 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC9□□□□□ -0.97
Zfp248Q640N4 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Bmp1-201ENSMUST00000022693 3684 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Zfp248Q640N4 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Zfp248Q640N4 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Zfp248Q640N4 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Zfp248Q640N4 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC9□□□□□ -0.97
Zfp248Q640N4 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC9□□□□□ -0.97
Zfp248Q640N4 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC9□□□□□ -0.97
Zfp248Q640N4 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC9□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms