Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Trpm1-210ENSMUST00000205731 2575 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 AC165351.1-201ENSMUST00000219078 2020 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Hsd3b3-204ENSMUST00000107019 1533 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm12337-201ENSMUST00000119634 400 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Mir6973a-201ENSMUST00000183646 78 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm9204-201ENSMUST00000212641 947 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC13.69□□□□□ -0.22
Scn9aQ62205 Ebi3-201ENSMUST00000003274 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Scn9aQ62205 Gm6641-201ENSMUST00000196100 1315 ntBASIC13.69□□□□□ -0.22
Scn9aQ62205 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Ighv7-1-201ENSMUST00000103474 363 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm22937-201ENSMUST00000103954 131 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm6158-201ENSMUST00000109467 904 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm13171-201ENSMUST00000117233 391 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm8111-201ENSMUST00000117659 987 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm13783-201ENSMUST00000131634 732 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm24943-201ENSMUST00000158329 433 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm37284-201ENSMUST00000193607 539 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm42599-201ENSMUST00000201308 469 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm8255-201ENSMUST00000218693 305 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.68□□□□□ -0.22
Scn9aQ62205 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Scn9aQ62205 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.67□□□□□ -0.22
Scn9aQ62205 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm23769-201ENSMUST00000104441 121 ntBASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm24078-201ENSMUST00000158184 103 ntBASIC13.67□□□□□ -0.22
Scn9aQ62205 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Pax5-205ENSMUST00000107827 1315 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm2345-201ENSMUST00000193451 589 ntBASIC13.67□□□□□ -0.22
Scn9aQ62205 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Scn9aQ62205 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 AC125108.1-201ENSMUST00000218986 2330 ntBASIC13.67□□□□□ -0.22
Scn9aQ62205 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Scn9aQ62205 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 306.2 ms