Protein–RNA interactions for Protein: Q61818

Rai1, Retinoic acid-induced protein 1, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rai1Q61818 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rai1Q61818 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Rai1Q61818 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm25148-201ENSMUST00000104611 123 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm11500-201ENSMUST00000118237 601 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Gm12663-201ENSMUST00000118481 958 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.29□□□□□ -0.6
Rai1Q61818 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC11.29□□□□□ -0.6
Rai1Q61818 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm26989-201ENSMUST00000182608 749 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Gm34379-201ENSMUST00000195036 290 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.29□□□□□ -0.6
Rai1Q61818 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC11.29□□□□□ -0.6
Rai1Q61818 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.29□□□□□ -0.6
Rai1Q61818 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC11.29□□□□□ -0.6
Rai1Q61818 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rai1Q61818 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rai1Q61818 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm14270-201ENSMUST00000118388 846 ntBASIC11.28□□□□□ -0.6
Rai1Q61818 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm20414-201ENSMUST00000172918 646 ntBASIC11.28□□□□□ -0.6
Rai1Q61818 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.28□□□□□ -0.6
Rai1Q61818 AC154589.2-201ENSMUST00000228847 251 ntBASIC11.28□□□□□ -0.6
Rai1Q61818 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rai1Q61818 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rai1Q61818 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Gm1840-201ENSMUST00000051687 1432 ntBASIC11.28□□□□□ -0.6
Rai1Q61818 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.28□□□□□ -0.6
Rai1Q61818 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.28□□□□□ -0.6
Rai1Q61818 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rai1Q61818 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Rai1Q61818 Gm3415-201ENSMUST00000110595 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Rai1Q61818 Gm3409-201ENSMUST00000110597 952 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Rai1Q61818 H2-Bl-203ENSMUST00000183999 358 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Gm42433-201ENSMUST00000196806 940 ntBASIC11.27□□□□□ -0.6
Rai1Q61818 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC11.27□□□□□ -0.6
Rai1Q61818 AC130477.1-201ENSMUST00000226982 420 ntBASIC11.27□□□□□ -0.6
Rai1Q61818 Gm3402-202ENSMUST00000077133 924 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Rai1Q61818 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC11.27□□□□□ -0.6
Rai1Q61818 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.27□□□□□ -0.6
Rai1Q61818 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Rab3c-202ENSMUST00000223922 2398 ntBASIC11.27□□□□□ -0.6
Rai1Q61818 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rai1Q61818 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 91.3 ms