Protein–RNA interactions for Protein: Q60636

Prdm1, PR domain zinc finger protein 1, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm1Q60636 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Mir5120-201ENSMUST00000175020 78 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm37246-201ENSMUST00000192665 835 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm7848-201ENSMUST00000210739 718 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC13.81□□□□□ -0.2
Prdm1Q60636 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC13.81□□□□□ -0.2
Prdm1Q60636 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Ccpg1-206ENSMUST00000140675 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Prdm1Q60636 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm38194-201ENSMUST00000194529 2211 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Pygo1-201ENSMUST00000038489 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm8199-201ENSMUST00000121323 823 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm6114-201ENSMUST00000182472 968 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm9555-201ENSMUST00000200908 583 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm45575-201ENSMUST00000210283 548 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Gm19208-201ENSMUST00000213861 912 ntBASIC13.8□□□□□ -0.2
Prdm1Q60636 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Prdm1Q60636 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Prdm1Q60636 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm13461-201ENSMUST00000120980 662 ntBASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC13.79□□□□□ -0.2
Prdm1Q60636 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm8100-201ENSMUST00000182906 988 ntBASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.79□□□□□ -0.2
Prdm1Q60636 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Prdm1Q60636 Gm10288-201ENSMUST00000084614 537 ntBASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms