Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Zfp125-201ENSMUST00000079237 2488 ntBASIC11.34□□□□□ -0.59
Xrcc1Q60596 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
Xrcc1Q60596 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Xrcc1Q60596 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Xrcc1Q60596 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
Xrcc1Q60596 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm43365-201ENSMUST00000196522 2106 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm14724-201ENSMUST00000118400 537 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm11450-201ENSMUST00000121144 333 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm14441-201ENSMUST00000121960 540 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm18734-201ENSMUST00000172937 808 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm28686-201ENSMUST00000187404 609 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm42980-201ENSMUST00000200582 1028 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm7848-201ENSMUST00000210739 718 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm21811-201ENSMUST00000096485 930 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.33□□□□□ -0.6
Xrcc1Q60596 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Xrcc1Q60596 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm8566-201ENSMUST00000120174 465 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Xrcc1Q60596 Gm2553-201ENSMUST00000215986 605 ntBASIC11.32□□□□□ -0.6
Xrcc1Q60596 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC11.32□□□□□ -0.6
Xrcc1Q60596 AC155637.1-201ENSMUST00000218560 636 ntBASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms