Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm15004-201ENSMUST00000119192 630 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm15595-201ENSMUST00000120840 961 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm28686-201ENSMUST00000187404 609 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm18893-201ENSMUST00000198416 943 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm45398-201ENSMUST00000210561 165 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 CT009713.8-202ENSMUST00000224732 385 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Shroom1Q5SX79 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Cog3-203ENSMUST00000227473 4197 ntBASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm4034-201ENSMUST00000187674 480 ntBASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm7395-201ENSMUST00000216059 1045 ntBASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Shroom1Q5SX79 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 AC130671.2-201ENSMUST00000227224 1621 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm11831-201ENSMUST00000141538 629 ntTSL 3 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm7666-201ENSMUST00000146631 819 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm35960-201ENSMUST00000202712 767 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm45219-201ENSMUST00000205602 465 ntBASIC12.59□□□□□ -0.39
Shroom1Q5SX79 Gm45575-201ENSMUST00000210283 548 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms