Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm13916-201ENSMUST00000117368 628 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm8731-201ENSMUST00000118088 412 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm13611-201ENSMUST00000118269 318 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm15566-201ENSMUST00000121130 590 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm5852-201ENSMUST00000194119 1021 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm35960-201ENSMUST00000202712 767 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm6905-201ENSMUST00000205729 511 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm13347-201ENSMUST00000120298 1353 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vps54Q5SPW0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm13722-201ENSMUST00000117964 3066 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm43051-201ENSMUST00000201096 2678 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm11783-201ENSMUST00000119549 885 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm38151-201ENSMUST00000195085 289 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm7395-201ENSMUST00000216059 1045 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 CT009713.8-202ENSMUST00000224732 385 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Tiam1-214ENSMUST00000164263 3569 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm38194-201ENSMUST00000194529 2211 ntBASIC14.17□□□□□ -0.14
Vps54Q5SPW0 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vps54Q5SPW0 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm42913-201ENSMUST00000197936 1853 ntBASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC14.16□□□□□ -0.14
Vps54Q5SPW0 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms