Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm23272-201ENSMUST00000104053 129 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm12856-201ENSMUST00000119471 1293 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm4034-201ENSMUST00000187674 480 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm45113-201ENSMUST00000207518 165 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm6108-201ENSMUST00000208365 367 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm18204-201ENSMUST00000209835 793 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 AC125117.2-201ENSMUST00000228344 1140 ntBASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Chac2-202ENSMUST00000101394 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ccdc85aQ5SP85 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm9089-201ENSMUST00000122027 526 ntBASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Ighv2-1-201ENSMUST00000170946 353 ntBASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm20536-201ENSMUST00000172588 406 ntTSL 3 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Olfr584-201ENSMUST00000098210 964 ntBASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.12□□□□□ -0.31
Ccdc85aQ5SP85 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm24791-201ENSMUST00000104284 131 ntBASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ccdc85aQ5SP85 Gm13351-201ENSMUST00000118087 414 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms