Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav5d-4Q5R1F6 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Hs6st2-201ENSMUST00000088172 4318 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm43760-201ENSMUST00000202120 3015 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Mir1938-201ENSMUST00000158746 100 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm20482-202ENSMUST00000174729 825 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm32999-201ENSMUST00000192693 562 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm4607-201ENSMUST00000206649 577 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm44651-201ENSMUST00000207343 372 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm5455-201ENSMUST00000058710 715 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Olfr582-201ENSMUST00000098212 960 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Frmpd2-203ENSMUST00000208577 5192 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm5847-201ENSMUST00000178959 1595 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav5d-4Q5R1F6 Gm17230-201ENSMUST00000171194 3942 ntBASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14441-201ENSMUST00000121960 540 ntBASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm7783-201ENSMUST00000204795 781 ntBASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm45331-201ENSMUST00000209868 554 ntBASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav5d-4Q5R1F6 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms