Protein–RNA interactions for Protein: Q571H0

Urb1, Nucleolar pre-ribosomal-associated protein 1, mousemouse

Known RBP Predictions only

Length 2,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Urb1Q571H0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm25076-201ENSMUST00000104098 132 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm18367-201ENSMUST00000176139 600 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm42816-201ENSMUST00000198433 325 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 AC121960.1-201ENSMUST00000227982 564 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Urb1Q571H0 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Mtr-201ENSMUST00000099856 8294 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gng12-205ENSMUST00000114226 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm14213-201ENSMUST00000119778 768 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm43778-201ENSMUST00000199438 199 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm18561-201ENSMUST00000206027 804 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm45500-201ENSMUST00000211676 803 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.92□□□□□ -0.66
Urb1Q571H0 Mcts2-201ENSMUST00000062148 917 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Urb1Q571H0 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Urb1Q571H0 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm37861-201ENSMUST00000193534 2869 ntBASIC10.91□□□□□ -0.66
Urb1Q571H0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm13022-201ENSMUST00000121181 285 ntBASIC10.91□□□□□ -0.66
Urb1Q571H0 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Urb1Q571H0 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Bmp4-202ENSMUST00000100676 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.91□□□□□ -0.66
Urb1Q571H0 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Urb1Q571H0 Gm12164-201ENSMUST00000121695 551 ntBASIC10.91□□□□□ -0.66
Urb1Q571H0 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.91□□□□□ -0.66
Urb1Q571H0 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms