Protein–RNA interactions for Protein: Q52KF3

Spire1, Protein spire homolog 1, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spire1Q52KF3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spire1Q52KF3 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Spire1Q52KF3 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Spire1Q52KF3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm45011-201ENSMUST00000207620 2297 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm23272-201ENSMUST00000104053 129 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm16166-201ENSMUST00000118291 787 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Mir1956-201ENSMUST00000157748 65 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm5982-201ENSMUST00000196234 512 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm42657-201ENSMUST00000201746 211 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm8574-201ENSMUST00000203207 924 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm45484-201ENSMUST00000210310 1141 ntBASIC12.09□□□□□ -0.47
Spire1Q52KF3 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Spire1Q52KF3 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Spire1Q52KF3 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Spire1Q52KF3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Spire1Q52KF3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Spire1Q52KF3 Cog3-203ENSMUST00000227473 4197 ntBASIC12.08□□□□□ -0.47
Spire1Q52KF3 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm12856-201ENSMUST00000119471 1293 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm11244-201ENSMUST00000121243 237 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm28388-201ENSMUST00000186262 437 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Gm3028-201ENSMUST00000213805 1119 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 AC118639.2-201ENSMUST00000226289 223 ntBASIC12.08□□□□□ -0.48
Spire1Q52KF3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Spire1Q52KF3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.07□□□□□ -0.48
Spire1Q52KF3 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms