Protein–RNA interactions for Protein: Q45KJ6

Lin28b, Protein lin-28 homolog B, mousemouse

Known RBP Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28bQ45KJ6 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Lin28bQ45KJ6 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Lin28bQ45KJ6 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 AC158355.1-201ENSMUST00000215895 1705 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Gm8731-201ENSMUST00000118088 412 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Gm8815-201ENSMUST00000173809 620 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Ppy-201ENSMUST00000017460 500 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Gm43830-201ENSMUST00000198760 1067 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Gm44124-201ENSMUST00000204159 472 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Gm6867-201ENSMUST00000219165 425 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Snora73b-201ENSMUST00000083419 205 ntBASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Lin28bQ45KJ6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Myo9b-202ENSMUST00000168839 7102 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm5778-201ENSMUST00000171003 1072 ntBASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Mir8115-201ENSMUST00000184992 119 ntBASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 AC154290.1-201ENSMUST00000223786 1240 ntBASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm8155-201ENSMUST00000216363 1612 ntBASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Ptpn2-203ENSMUST00000122412 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Lin28bQ45KJ6 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Sept4-203ENSMUST00000107960 1653 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Gm14193-201ENSMUST00000105067 153 ntBASIC11.25□□□□□ -0.61
Lin28bQ45KJ6 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms