Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Acot6-202ENSMUST00000222921 3622 ntBASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.95□□□□□ -0.5
Fam196aQ3USH1 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm15610-201ENSMUST00000120584 195 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm25226-201ENSMUST00000158198 123 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm20822-201ENSMUST00000165756 687 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm20828-201ENSMUST00000170889 687 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm7069-201ENSMUST00000182418 1008 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm6644-201ENSMUST00000186507 951 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm17796-201ENSMUST00000189015 1213 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm39288-201ENSMUST00000210554 446 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Park2-210ENSMUST00000218435 865 ntTSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm2696-202ENSMUST00000220393 684 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 AC164618.2-201ENSMUST00000224770 573 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Rbm8a-206ENSMUST00000200647 2620 ntTSL 2 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Gm5639-201ENSMUST00000122305 2403 ntBASIC11.94□□□□□ -0.5
Fam196aQ3USH1 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Uqcrc2-201ENSMUST00000033176 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 1700011M02Rik-201ENSMUST00000113602 420 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm13204-201ENSMUST00000120110 821 ntBASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm12791-201ENSMUST00000120788 655 ntBASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm16459-201ENSMUST00000121443 686 ntBASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm3329-201ENSMUST00000159873 556 ntBASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm24809-201ENSMUST00000175318 271 ntBASIC11.93□□□□□ -0.5
Fam196aQ3USH1 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Fam196aQ3USH1 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms