Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Gm24089-201ENSMUST00000093696 109 ntBASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Spg11Q3UHA3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm13456-201ENSMUST00000118928 1365 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm15197-201ENSMUST00000120526 478 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm13134-201ENSMUST00000132106 738 ntTSL 3 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm23582-201ENSMUST00000158530 139 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm9372-201ENSMUST00000168454 430 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Mir6387-201ENSMUST00000184042 108 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Letm2-206ENSMUST00000210234 837 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 AC107711.4-201ENSMUST00000228948 440 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 AY761184-201ENSMUST00000071886 503 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm5740-201ENSMUST00000211003 1857 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm22937-201ENSMUST00000103954 131 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm43564-201ENSMUST00000196185 211 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm40332-201ENSMUST00000199847 938 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm6478-201ENSMUST00000099450 742 ntBASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Spg11Q3UHA3 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Mir874-201ENSMUST00000104769 76 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 1700064H15Rik-201ENSMUST00000119133 394 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm10807-201ENSMUST00000177134 795 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm5706-201ENSMUST00000181525 993 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm21577-201ENSMUST00000190823 697 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm20802-201ENSMUST00000190832 698 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm23129-201ENSMUST00000104259 132 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm22495-201ENSMUST00000104492 126 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm15373-201ENSMUST00000121495 214 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 2810403D21Rik-204ENSMUST00000144421 747 ntTSL 3 BASIC10.84□□□□□ -0.67
Spg11Q3UHA3 Gm7805-201ENSMUST00000154348 448 ntBASIC10.84□□□□□ -0.67
Spg11Q3UHA3 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms