Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm7114-201ENSMUST00000190159 1789 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 AC164702.1-201ENSMUST00000220135 2212 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 AC130671.2-201ENSMUST00000227224 1621 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm7666-201ENSMUST00000146631 819 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm9132-201ENSMUST00000210182 832 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Tepsin-202ENSMUST00000093901 2770 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm44152-201ENSMUST00000205007 1691 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm44758-201ENSMUST00000206096 2068 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ssbp4Q3U4B1 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm5053-201ENSMUST00000208361 1678 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm37348-201ENSMUST00000193104 1789 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm15573-201ENSMUST00000119487 540 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm22144-201ENSMUST00000157402 102 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Mir6546-201ENSMUST00000184460 62 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm5852-201ENSMUST00000194119 1021 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm17831-201ENSMUST00000205579 900 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 AC141438.2-201ENSMUST00000215068 271 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Gm8522-201ENSMUST00000118416 1929 ntBASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ssbp4Q3U4B1 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms