Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Spp2-202ENSMUST00000176708 710 ntTSL 2 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm21963-201ENSMUST00000179519 330 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm28281-201ENSMUST00000185658 187 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm29067-201ENSMUST00000190821 470 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Eif3k-202ENSMUST00000207683 647 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm10080-201ENSMUST00000075585 438 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Magea8-201ENSMUST00000070141 1646 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm20495-201ENSMUST00000173902 235 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm7761-201ENSMUST00000190510 921 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Gm43539-201ENSMUST00000196190 363 ntTSL 3 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 AC154435.1-201ENSMUST00000223938 959 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 AC124686.1-201ENSMUST00000225546 522 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Olfr578-201ENSMUST00000056235 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Tatdn3-202ENSMUST00000085633 1089 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Ush2AQ2QI47 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm8817-201ENSMUST00000126769 693 ntTSL 2 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Rsrc1-209ENSMUST00000162693 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm5501-201ENSMUST00000165917 832 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm5311-201ENSMUST00000203518 709 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Apoo-201ENSMUST00000113895 1173 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm8809-201ENSMUST00000119367 743 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm5766-202ENSMUST00000161633 799 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm10537-201ENSMUST00000192625 1698 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Arl15-202ENSMUST00000224068 1002 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Klk1b8-201ENSMUST00000072204 859 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Serpina5-201ENSMUST00000021495 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm5766-201ENSMUST00000160520 1977 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm6210-201ENSMUST00000204734 1942 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Bpi-202ENSMUST00000109499 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm44190-201ENSMUST00000205083 1401 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 9630002D21Rik-201ENSMUST00000221128 1351 ntTSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Rhox1-201ENSMUST00000115210 883 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm15208-201ENSMUST00000134448 493 ntTSL 3 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm10086-201ENSMUST00000136334 354 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 1700056N10Rik-201ENSMUST00000141875 1043 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm5274-201ENSMUST00000182641 1003 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 AC153948.2-201ENSMUST00000218112 505 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm18362-201ENSMUST00000221786 529 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 AC154687.1-201ENSMUST00000224875 677 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Prss23-204ENSMUST00000207932 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Mkln1os-201ENSMUST00000139185 1864 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm9864-201ENSMUST00000090043 1656 ntBASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Rnf183-202ENSMUST00000107454 1407 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Ush2AQ2QI47 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms