Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 5730422E09Rik-201ENSMUST00000180733 1740 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm15727-201ENSMUST00000122416 437 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 2810429I04Rik-204ENSMUST00000185835 923 ntTSL 3 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm29689-201ENSMUST00000221076 589 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm5468-202ENSMUST00000227851 682 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm9867-201ENSMUST00000192212 2647 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 AC158636.1-201ENSMUST00000220118 1393 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Lrrc75aos2-202ENSMUST00000128647 1227 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm4982-201ENSMUST00000160440 1098 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm22662-201ENSMUST00000175290 256 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm44304-201ENSMUST00000200509 145 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Gm44196-203ENSMUST00000204359 1190 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 AC113291.2-201ENSMUST00000215490 1205 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 AC154506.2-201ENSMUST00000225481 1276 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 AC102523.1-201ENSMUST00000228706 1144 ntBASIC10.56□□□□□ -0.72
Chd8Q09XV5 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.56□□□□□ -0.72
Chd8Q09XV5 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm8725-201ENSMUST00000221829 1333 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm16301-201ENSMUST00000161959 295 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 AC134248.1-201ENSMUST00000216113 1176 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 AC134601.2-201ENSMUST00000221071 130 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 AC116797.2-202ENSMUST00000223587 1017 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 AC093022.5-201ENSMUST00000226841 1079 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Taar1-201ENSMUST00000051532 1114 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Cxcr1-201ENSMUST00000053389 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Dpep2-202ENSMUST00000117555 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Rdh7-201ENSMUST00000047199 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Pxmp4-202ENSMUST00000109703 560 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm12397-201ENSMUST00000117674 615 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Atad3aos-204ENSMUST00000174185 482 ntTSL 3 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm12424-201ENSMUST00000179673 447 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm7928-201ENSMUST00000181249 701 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm26943-201ENSMUST00000182295 957 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Gm3198-201ENSMUST00000208725 1026 ntBASIC10.55□□□□□ -0.72
Chd8Q09XV5 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Chd8Q09XV5 4933427E13Rik-201ENSMUST00000044347 381 ntTSL 5 BASIC10.55□□□□□ -0.72
Chd8Q09XV5 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms