Protein–RNA interactions for Protein: Q02853

Mmp11, Stromelysin-3, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp11Q02853 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Mir7677-201ENSMUST00000184226 67 ntBASIC11.52□□□□□ -0.57
Mmp11Q02853 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 AC093022.1-201ENSMUST00000226949 1072 ntBASIC11.52□□□□□ -0.57
Mmp11Q02853 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.52□□□□□ -0.57
Mmp11Q02853 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Mmp11Q02853 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.52□□□□□ -0.57
Mmp11Q02853 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Lsm11-202ENSMUST00000129820 6453 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm14017-201ENSMUST00000121934 386 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm11960-201ENSMUST00000122068 925 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm4310-201ENSMUST00000177847 889 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm2383-201ENSMUST00000181461 807 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm27530-201ENSMUST00000184096 98 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm2260-201ENSMUST00000184965 657 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm38228-201ENSMUST00000193169 1293 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm2553-201ENSMUST00000215986 605 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm43242-201ENSMUST00000199507 1776 ntBASIC11.51□□□□□ -0.57
Mmp11Q02853 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Mmp11Q02853 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Mmp11Q02853 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC11.5□□□□□ -0.57
Mmp11Q02853 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm23596-201ENSMUST00000104304 132 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm11700-201ENSMUST00000119409 403 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm28686-201ENSMUST00000187404 609 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm3332-201ENSMUST00000189337 928 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm18056-201ENSMUST00000207670 568 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm18061-201ENSMUST00000208350 562 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm18063-201ENSMUST00000208529 568 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm18052-201ENSMUST00000208750 559 ntBASIC11.5□□□□□ -0.57
Mmp11Q02853 Gm18212-201ENSMUST00000211678 889 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms