Protein–RNA interactions for Protein: Q01853

Vcp, Transitional endoplasmic reticulum ATPase, mousemouse

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcpQ01853 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VcpQ01853 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.68□□□□□ -0.38
VcpQ01853 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
VcpQ01853 Gm23153-201ENSMUST00000175323 313 ntBASIC12.68□□□□□ -0.38
VcpQ01853 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.68□□□□□ -0.38
VcpQ01853 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VcpQ01853 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
VcpQ01853 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.68□□□□□ -0.38
VcpQ01853 Gm1821-202ENSMUST00000227415 750 ntBASIC12.68□□□□□ -0.38
VcpQ01853 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
VcpQ01853 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
VcpQ01853 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Gm13142-201ENSMUST00000117213 1453 ntBASIC12.67□□□□□ -0.38
VcpQ01853 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Pmp22-202ENSMUST00000108700 733 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Gm12015-201ENSMUST00000117065 843 ntBASIC12.67□□□□□ -0.38
VcpQ01853 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.67□□□□□ -0.38
VcpQ01853 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Gm28071-201ENSMUST00000190355 478 ntBASIC12.67□□□□□ -0.38
VcpQ01853 Gm37246-201ENSMUST00000192665 835 ntBASIC12.67□□□□□ -0.38
VcpQ01853 AY036118-201ENSMUST00000200021 923 ntBASIC12.67□□□□□ -0.38
VcpQ01853 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC12.67□□□□□ -0.38
VcpQ01853 Gm44593-201ENSMUST00000208372 1249 ntTSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
VcpQ01853 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
VcpQ01853 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
VcpQ01853 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.67□□□□□ -0.38
VcpQ01853 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC12.67□□□□□ -0.38
VcpQ01853 Cnot10-201ENSMUST00000070117 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
VcpQ01853 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC12.66□□□□□ -0.38
VcpQ01853 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.66□□□□□ -0.38
VcpQ01853 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VcpQ01853 Arhgef3-204ENSMUST00000225949 3198 ntBASIC12.66□□□□□ -0.38
VcpQ01853 Tas1r1-201ENSMUST00000030792 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
VcpQ01853 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
VcpQ01853 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.66□□□□□ -0.38
VcpQ01853 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
VcpQ01853 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC12.66□□□□□ -0.38
VcpQ01853 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC12.66□□□□□ -0.38
VcpQ01853 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.66□□□□□ -0.38
VcpQ01853 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms