Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC9.94□□□□□ -0.82
Npas1P97459 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm27437-201ENSMUST00000183429 107 ntBASIC9.94□□□□□ -0.82
Npas1P97459 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC9.94□□□□□ -0.82
Npas1P97459 Gm44882-201ENSMUST00000205702 802 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Gm5626-201ENSMUST00000222151 1058 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Gm19163-201ENSMUST00000223313 780 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm24136-201ENSMUST00000083374 165 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC9.94□□□□□ -0.82
Npas1P97459 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Npas1P97459 Wdcp-201ENSMUST00000053034 2892 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Mybph-202ENSMUST00000191577 2320 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Sfxn5-201ENSMUST00000045846 3656 ntAPPRIS P2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Prr30-202ENSMUST00000187304 2104 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Npas1P97459 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Npas1P97459 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.94□□□□□ -0.82
Npas1P97459 Dclk1-213ENSMUST00000199702 2922 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Dnm3-202ENSMUST00000086074 7523 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Gm10463-202ENSMUST00000195772 2889 ntBASIC9.93□□□□□ -0.82
Npas1P97459 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Agrn-202ENSMUST00000105574 7193 ntTSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Gm6560-201ENSMUST00000198588 1591 ntBASIC9.93□□□□□ -0.82
Npas1P97459 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC9.93□□□□□ -0.82
Npas1P97459 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Mir6977-201ENSMUST00000184960 64 ntBASIC9.93□□□□□ -0.82
Npas1P97459 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 AC135669.1-201ENSMUST00000213585 412 ntBASIC9.93□□□□□ -0.82
Npas1P97459 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC9.93□□□□□ -0.82
Npas1P97459 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Prkd2-201ENSMUST00000086104 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Nrp1-201ENSMUST00000026917 3597 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Dcun1d4-203ENSMUST00000113558 4023 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.93□□□□□ -0.82
Npas1P97459 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Npas1P97459 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Rab14-202ENSMUST00000113025 4346 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 AC207128.2-201ENSMUST00000223708 1924 ntBASIC9.92□□□□□ -0.82
Npas1P97459 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Zfp280d-211ENSMUST00000184036 3459 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 Idua-202ENSMUST00000112563 3373 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Gm12091-201ENSMUST00000146791 830 ntBASIC9.92□□□□□ -0.82
Npas1P97459 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Gm7029-201ENSMUST00000173226 450 ntBASIC9.92□□□□□ -0.82
Npas1P97459 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Npas1P97459 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC9.92□□□□□ -0.82
Npas1P97459 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms