Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Timm10b-203ENSMUST00000106783 3273 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Ntpcr-202ENSMUST00000065135 1497 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Arap1-201ENSMUST00000084895 4404 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcaP82350 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcaP82350 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 AC140462.2-201ENSMUST00000225718 2433 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcaP82350 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC9.92□□□□□ -0.82
SgcaP82350 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm13492-201ENSMUST00000119772 665 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm5866-201ENSMUST00000177881 973 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm37497-201ENSMUST00000195830 798 ntBASIC9.92□□□□□ -0.82
SgcaP82350 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC9.92□□□□□ -0.82
SgcaP82350 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm15823-201ENSMUST00000064305 670 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SgcaP82350 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Gm6605-201ENSMUST00000031488 2574 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Pde2a-202ENSMUST00000166652 3977 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Col6a3-202ENSMUST00000097653 9001 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Gm19165-201ENSMUST00000204453 1982 ntBASIC9.92□□□□□ -0.82
SgcaP82350 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 Clip1-202ENSMUST00000063905 4589 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SgcaP82350 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SgcaP82350 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 1700030J22Rik-202ENSMUST00000213068 1482 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Calr-201ENSMUST00000003912 2184 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Oprm1-212ENSMUST00000105603 2053 ntTSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SgcaP82350 Gm13315-201ENSMUST00000120376 991 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Gm12363-201ENSMUST00000122250 668 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.91□□□□□ -0.82
SgcaP82350 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC9.91□□□□□ -0.82
SgcaP82350 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
SgcaP82350 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SgcaP82350 Gm8810-201ENSMUST00000172895 754 ntBASIC9.91□□□□□ -0.82
SgcaP82350 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms