Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcdP82347 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SgcdP82347 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
SgcdP82347 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 AC124397.2-201ENSMUST00000225575 2215 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Gm10652-201ENSMUST00000199790 2622 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcdP82347 Rpl3-ps1-201ENSMUST00000120557 1210 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC11.03□□□□□ -0.64
SgcdP82347 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC11.03□□□□□ -0.64
SgcdP82347 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC11.03□□□□□ -0.64
SgcdP82347 Gm43118-201ENSMUST00000199149 775 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.03□□□□□ -0.64
SgcdP82347 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.03□□□□□ -0.64
SgcdP82347 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
SgcdP82347 Olfr1090-202ENSMUST00000215991 2103 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
SgcdP82347 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 AC159195.3-201ENSMUST00000225162 2211 ntBASIC11.03□□□□□ -0.64
SgcdP82347 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
SgcdP82347 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.02□□□□□ -0.64
SgcdP82347 Colec12-201ENSMUST00000040069 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.02□□□□□ -0.64
SgcdP82347 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
SgcdP82347 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Gm24231-201ENSMUST00000104315 133 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC11.02□□□□□ -0.65
SgcdP82347 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Mir5132-201ENSMUST00000175166 71 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Gm7118-201ENSMUST00000200167 1003 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Olfr284-202ENSMUST00000206647 966 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SgcdP82347 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Cts7-204ENSMUST00000225321 1257 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Celf3-215ENSMUST00000200342 3173 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC11.02□□□□□ -0.65
SgcdP82347 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC11.02□□□□□ -0.65
SgcdP82347 Gm5620-201ENSMUST00000077991 1348 ntBASIC11.02□□□□□ -0.65
SgcdP82347 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
SgcdP82347 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Bach1-201ENSMUST00000026703 5867 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
SgcdP82347 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
SgcdP82347 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC11.01□□□□□ -0.65
SgcdP82347 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.01□□□□□ -0.65
SgcdP82347 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
SgcdP82347 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms