Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Sf3b6P59708 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Chrng-201ENSMUST00000027470 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Sf3b6P59708 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.52□□□□□ -0.72
Sf3b6P59708 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Gm37348-201ENSMUST00000193104 1789 ntBASIC10.52□□□□□ -0.72
Sf3b6P59708 Gm18806-201ENSMUST00000207607 1775 ntBASIC10.52□□□□□ -0.72
Sf3b6P59708 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Sf3b6P59708 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC10.52□□□□□ -0.72
Sf3b6P59708 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Sf3b6P59708 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm29245-201ENSMUST00000187332 1416 ntBASIC10.52□□□□□ -0.73
Sf3b6P59708 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm38241-201ENSMUST00000192641 898 ntBASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm5904-201ENSMUST00000210286 865 ntBASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm807-202ENSMUST00000224929 408 ntBASIC10.52□□□□□ -0.73
Sf3b6P59708 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm8793-201ENSMUST00000183069 1303 ntBASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Sf3b6P59708 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.52□□□□□ -0.73
Sf3b6P59708 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 H2-T10-201ENSMUST00000166442 1481 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm13326-201ENSMUST00000118730 1011 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm11700-201ENSMUST00000119409 403 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm15610-201ENSMUST00000120584 195 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm8062-201ENSMUST00000139696 444 ntBASIC10.51□□□□□ -0.73
Sf3b6P59708 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC10.51□□□□□ -0.73
Sf3b6P59708 Gm8738-201ENSMUST00000172606 329 ntBASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms